Workflows
Step-by-step workflows mapped to research stages and methods.
Design
Data QC
+2
FOCUS: Find → Organize → Condense → Understand → Synthesize
A research discovery workflow that moves from signal collection to validated synthesis.
Literature
Verification
Synthesis
Design
Data QC
+5
NotebookLM: Source-Grounded Research Workflow
A reproducible research workflow using NotebookLM as a source-grounded research assistant, organized in 5 phases covering scoping, corpus building, evidence extraction, synthesis, and verification.
NotebookLM
Source Grounded
Verification
Design
Analysis
+1
EXHYTE Cycle (Explore → Hypothesize → Test)
A data-intensive discovery loop that formalizes exploration, hypothesis generation, and validation.
Ideation
Hypotheses
Validation
Design
AutoResearcher: 4-Stage Ideation Pipeline
Structured ideation with knowledge curation, idea generation, filtering, and expert synthesis.
Ideation
Knowledge Graphs
Design
DeepResearchEco: Recursive Search Workflow
A recursive literature search loop balancing depth and breadth for complex questions.
Literature
Recursion
Design
Scideator: Facet-Based Recombination
Breaks fixation by recombining purpose, mechanism, and evaluation facets.
Creativity
Novelty
Data QC
Analysis
Plan → Execute → Test → Fix (Code & Data Analysis)
Reliable AI-assisted coding workflow with testing and iterative repair.
Code
Analysis
Measures
Analysis
BioPlanner: Protocol Formulation
Convert high-level goals into executable lab protocols with validation.
Protocols
Lab
Design
Measures
+4
Six-Stage Autonomous Scientist Framework
High-level map of the research lifecycle for organizing resources and flows.
Lifecycle
Framework
Interpretation
Writing
Manuscript Review Pipeline
A staged peer-review simulation to stress-test logic, structure, and language.
Peer Review
Revision
Design
Measures
Operationalization
Systematic conceptual refinement and variable definition.
Toolkit
Operationalization
Design
Data QC
Design
Compliance-Ready Data
Ensure data handling meets privacy and ethics standards.
Toolkit
Compliance
Ethics
Analysis
Stress Test
Rigorous robustness checks and sensitivity analysis.
Toolkit
Robustness
Analysis
Writing
Peer Review
Citation Hygiene
Ensure claims are supported and citations are correct.
Toolkit
Citations
Writing
Data QC
Writing
Repro Pack
Prepare a complete replication package.
Toolkit
Reproducibility
Packaging
Peer Review
Writing
Revise and Rebut
Manage peer review responses and revisions.
Toolkit
Revision
Peer Review